key polar

Determine key polar interactions between the ligand and the active site, and measure the distances.

Part 1. Visualisation of protein molecules and ligand interactions. Extracting the liganda)Download pdb file “6lze”(from www.pdb.org)and open it in PyMOL. There are very clear instructions on how to install PyMOL, open files and manipulate the viewin the “modellingmanual” available fromthe practical E Moodle page(Reference 1, Chapter 4). It is highly recommended that you work your […]

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